Sequence Similarity Clusters for the Entities in PDB 2XFJ

Entity #1 | Chains: A
BETA-SECRETASE 1 protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 19 3178
95 % 62 365 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 62 365 16
70 % 62 365 24
50 % 63 377 41
40 % 63 377 56
30 % 593 1116 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures