Sequence Similarity Clusters for the Entities in PDB 2X78

Entity #1 | Chains: A,B,C
INTEGRASE protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 2691
95 % 1 5 2876 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 1 5 2936
70 % 1 5 2899
50 % 1 5 2859
40 % 1 5 2785
30 % 1 5 2575

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2X78 1 A, B, C INTEGRASE CATALYTIC CORE, RESIDUES 861-1060 11642
2 2X6N 1 A, B, C, D, E, F INTEGRASE CATALYTIC CORE, RESIDUES 861-1060 11642
3 3DLR 1 A Integrase catalytic core domain 11642
4 2X6S 1 A, B, C, D, E, F INTEGRASE CATALYTIC CORE, RESIDUES 861-1060 11642
5 2X74 1 A, B, C, D, E, F INTEGRASE CATALYTIC CORE, RESIDUES 861-1060 11642