Sequence Similarity Clusters for the Entities in PDB 2X78

Entity #1 | Chains: A,B,C
INTEGRASE protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 2867
95 % 1 5 3039 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 1 5 3099
70 % 1 5 3063
50 % 1 5 2997
40 % 1 5 2911
30 % 1 5 2695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures