Sequence Similarity Clusters for the Entities in PDB 2X78

Entity #1 | Chains: A,B,C
INTEGRASE protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 2721
95 % 1 5 2911 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 1 5 2973
70 % 1 5 2931
50 % 1 5 2879
40 % 1 5 2802
30 % 1 5 2585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures