Sequence Similarity Clusters for the Entities in PDB 2X00

Entity #1 | Chains: A,B,C,E
SOLUBLE ACETYLCHOLINE RECEPTOR protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 26 139
95 % 29 60 55 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.8
PDBFlex
90 % 30 62 40
70 % 31 63 49
50 % 31 63 85
40 % 31 63 105
30 % 53 128 23
Entity #2 | Chains: D
SOLUBLE ACETYLCHOLINE RECEPTOR protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57607
95 % 30 60 55
90 % 31 62 40
70 % 32 63 49
50 % 32 63 85
40 % 32 63 105
30 % 54 128 23

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.