Sequence Similarity Clusters for the Entities in PDB 2WY8

Entity #1 | Chains: A
COMPLEMENT C3D FRAGMENT protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 16 1197
95 % 1 16 1629 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 1 16 1665
70 % 2 18 1414
50 % 2 18 1472
40 % 2 18 1493
30 % 2 18 1469
Entity #2 | Chains: Q
IGG-BINDING PROTEIN protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46352
95 % 1 2 34636 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 2 33125
70 % 1 2 29533
50 % 1 2 25303
40 % 1 2 22328
30 % 1 2 18902

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.