Sequence Similarity Clusters for the Entities in PDB 2WY8

Entity #1 | Chains: A
COMPLEMENT C3D FRAGMENT protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 17 1173
95 % 1 17 1576 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 1 17 1610
70 % 2 19 1387
50 % 2 19 1437
40 % 2 19 1447
30 % 2 19 1422
Entity #2 | Chains: Q
IGG-BINDING PROTEIN protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48680
95 % 1 2 36349
90 % 1 2 34708
70 % 1 2 30842
50 % 1 2 26370
40 % 1 2 23261
30 % 1 2 19709

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures