Sequence Similarity Clusters for the Entities in PDB 2WQA

Entity #1 | Chains: A,B,C,D
TRANSTHYRETIN protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 147 150 46
95 % 247 252 11
90 % 247 252 12
70 % 253 258 18
50 % 257 262 20
40 % 257 262 28
30 % 268 273 31
Entity #2 | Chains: E,F
RETINOL-BINDING PROTEIN 4 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5552
95 % 8 10 4401
90 % 20 23 1872
70 % 21 24 1809
50 % 21 24 1844
40 % 21 24 1854
30 % 21 24 1770

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.