Sequence Similarity Clusters for the Entities in PDB 2WPV

Entity #1 | Chains: A,C,E,G
UPF0363 PROTEIN YOR164C protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 10255
95 % 1 5 3486 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 1 5 3534
70 % 1 5 3490
50 % 1 5 3408
40 % 1 5 3299
30 % 1 5 3089
Entity #2 | Chains: B,D,F,H
UBIQUITIN-LIKE PROTEIN MDY2 protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 2946
95 % 1 5 3649 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 5 3701
70 % 1 5 3648
50 % 1 5 3548
40 % 1 5 3424
30 % 1 5 3197

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.