Sequence Similarity Clusters for the Entities in PDB 2WMB

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 337 364 20
95 % 352 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 352 379 34
70 % 352 379 42
50 % 373 404 55
40 % 396 460 42
30 % 3124 3759 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 86 160
95 % 87 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 91 109 152
70 % 91 109 173
50 % 91 109 205
40 % 91 109 229
30 % 95 115 227
Entity #3 | Chains: I
LINEAR RKLFD protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.