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STRUCTURAL AND THERMODYNAMIC CONSEQUENCES OF CYCLIZATION OF PEPTIDE LIGANDS FOR THE RECRUITMENT SITE OF CYCLIN A
Sequence Clustering and Redundancy Reduction Results
2WMA
Sequence Clusters for the Sequence Entities in PDB 2WMA
Entity #1: Chains: A,C - CELL DIVISION PROTEIN KINASE 2 protein, length: 303 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 316 331 6
95% 331 346 13
90% 331 346 16
70% 331 346 21
50% 346 365 22
40% 371 411 26
30% 2332 2704 2
Entity #2: Chains: B,D - CYCLIN-A2 protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 70 80 61
95% 86 96 84
90% 90 100 83
70% 90 100 103
50% 90 100 141
40% 90 100 170
30% 90 102 190
Entity #3: Chains: E - CYCLIC RKLFN-NH2 protein, length: 5 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.