Sequence Similarity Clusters for the Entities in PDB 2WMA

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 347 367 23
95 % 363 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 363 383 38
70 % 363 383 44
50 % 384 408 73
40 % 413 465 50
30 % 3543 4073 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 86 169
95 % 92 105 155 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 96 109 161
70 % 96 109 178
50 % 96 109 219
40 % 96 109 237
30 % 100 115 243
Entity #3 | Chains: E
CYCLIC RKLFN-NH2 protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures