Sequence Similarity Clusters for the Entities in PDB 2WMA

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 345 365 23
95 % 360 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 360 380 38
70 % 360 380 44
50 % 381 405 67
40 % 410 462 49
30 % 3436 3961 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 86 169
95 % 92 105 154 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 96 109 160
70 % 96 109 176
50 % 96 109 218
40 % 96 109 237
30 % 100 115 242
Entity #3 | Chains: E
CYCLIC RKLFN-NH2 protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures