Sequence Similarity Clusters for the Entities in PDB 2WIP

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 350 364 20
95 % 365 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 365 379 34
70 % 365 379 42
50 % 387 404 55
40 % 417 460 42
30 % 3315 3759 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 265 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 76 86 160
95 % 95 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 99 109 152
70 % 99 109 173
50 % 99 109 205
40 % 99 109 229
30 % 104 115 227

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.