Sequence Similarity Clusters for the Entities in PDB 2WIN

Entity #1 | Chains: A,C,E,G
COMPLEMENT C3 BETA CHAIN protein, length: 645 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 16 1267
95 % 16 22 1284
90 % 16 22 1307
70 % 16 22 1337
50 % 16 22 1380
40 % 19 25 1261
30 % 19 25 1237
Entity #2 | Chains: B,D,F,H
COMPLEMENT C3B ALPHA' CHAIN protein, length: 915 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 4161
95 % 10 15 2083
90 % 10 15 2141
70 % 10 15 2151
50 % 10 15 2129
40 % 10 15 2133
30 % 10 15 2035
Entity #3 | Chains: I,J,K,L
COMPLEMENT FACTOR B protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 16089
95 % 4 5 7060
90 % 4 5 7027
70 % 4 5 6829
50 % 4 5 6320
40 % 4 5 5897
30 % 8 9 3890
Entity #4 | Chains: M,N,P,Q
STAPHYLOCOCCAL COMPLEMENT INHIBITOR protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 4130
95 % 4 7 4903
90 % 4 7 4920
70 % 4 7 4852
50 % 4 7 4665
40 % 6 9 2924
30 % 9 12 2168

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.