Sequence Similarity Clusters for the Entities in PDB 2WIN

Entity #1 | Chains: A,C,E,G
COMPLEMENT C3 BETA CHAIN protein, length: 645 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 15 1338
95 % 16 21 1312
90 % 16 21 1336
70 % 16 21 1363
50 % 16 21 1414
40 % 19 24 1288
30 % 19 24 1264
Entity #2 | Chains: B,D,F,H
COMPLEMENT C3B ALPHA' CHAIN protein, length: 915 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 5385
95 % 10 14 2181
90 % 10 14 2243
70 % 10 14 2238
50 % 10 14 2221
40 % 10 14 2219
30 % 10 14 2121
Entity #3 | Chains: I,J,K,L
COMPLEMENT FACTOR B protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 15692
95 % 4 4 9337
90 % 4 4 9232
70 % 4 4 8793
50 % 4 4 7991
40 % 4 4 7334
30 % 8 8 4445
Entity #4 | Chains: M,N,P,Q
STAPHYLOCOCCAL COMPLEMENT INHIBITOR protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 5348
95 % 4 6 5964
90 % 4 6 5956
70 % 4 6 5820
50 % 4 6 5463
40 % 6 8 3190
30 % 9 11 2315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.