Sequence Similarity Clusters for the Entities in PDB 2WII

Entity #1 | Chains: A
COMPLEMENT C3 BETA CHAIN protein, length: 645 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 1218
95 % 5 24 1215 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.1
PDBFlex
90 % 5 24 1242
70 % 5 24 1276
50 % 5 24 1328
40 % 6 27 1231
30 % 6 27 1207
Entity #2 | Chains: B
COMPLEMENT C3B ALPHA' CHAIN protein, length: 915 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 3506
95 % 3 17 1935 Flexibility: Medium
Max RMSD: 31.0, Avg RMSD: 7.1
PDBFlex
90 % 3 17 1982
70 % 3 17 2005
50 % 3 17 2009
40 % 3 17 1999
30 % 3 17 1928
Entity #3 | Chains: C
COMPLEMENT FACTOR H protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57002
95 % 1 1 40622
90 % 1 1 38815
70 % 1 1 34467
50 % 1 1 29436
40 % 1 1 25977
30 % 1 1 22063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.