Sequence Similarity Clusters for the Entities in PDB 2WHB

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 335 361 21
95 % 350 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 350 376 34
70 % 350 376 42
50 % 371 401 55
40 % 394 457 41
30 % 3093 3732 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 86 158
95 % 86 105 146 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 90 109 151
70 % 90 109 172
50 % 90 109 202
40 % 90 109 225
30 % 94 115 223
Entity #3 | Chains: E,F
ARG-ARG-L3O-PFF protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.