Sequence Similarity Clusters for the Entities in PDB 2WHB

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 337 366 26
95 % 354 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 354 383 38
70 % 354 383 46
50 % 381 433 64
40 % 398 465 53
30 % 3537 4287 2
Entity #2 | Chains: B,D
CYCLIN-A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 64 83 185
95 % 86 105 160 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 90 109 163
70 % 90 109 181
50 % 90 109 223
40 % 90 109 249
30 % 94 115 259
Entity #3 | Chains: E,F
ARG-ARG-L3O-PFF protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures