Sequence Similarity Clusters for the Entities in PDB 2W81

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 2177
95 % 4 6 2773
90 % 4 6 2819
70 % 4 6 2817
50 % 5 7 2646
40 % 6 8 2357
30 % 6 8 2205
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5221
95 % 5 7 3437
90 % 6 8 2994
70 % 9 13 1906
50 % 9 13 1931
40 % 9 13 1941
30 % 9 13 1849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.