Sequence Similarity Clusters for the Entities in PDB 2W80

Entity #1 | Chains: A,B,E,G
COMPLEMENT FACTOR H protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2177
95 % 3 6 2770
90 % 3 6 2817
70 % 3 6 2814
50 % 4 7 2642
40 % 5 8 2356
30 % 5 8 2201
Entity #2 | Chains: C,D,F,H
FACTOR H BINDING PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 5217
95 % 4 7 3433
90 % 5 8 2990
70 % 8 13 1901
50 % 8 13 1927
40 % 8 13 1940
30 % 8 13 1844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.