Sequence Similarity Clusters for the Entities in PDB 2W80

Entity #1 | Chains: A,B,E,G
COMPLEMENT FACTOR H protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2624
95 % 3 6 3271
90 % 3 6 3320
70 % 3 6 3291
50 % 4 7 3089
40 % 5 8 2743
30 % 5 8 2571
Entity #2 | Chains: C,D,F,H
FACTOR H BINDING PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5597
95 % 4 8 3676
90 % 5 9 3275
70 % 8 14 2193
50 % 8 14 2181
40 % 8 14 2167
30 % 8 14 2076

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.