Sequence Similarity Clusters for the Entities in PDB 2W80

Entity #1 | Chains: A,B,E,G
COMPLEMENT FACTOR H protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2236
95 % 3 6 2843
90 % 3 6 2886
70 % 3 6 2882
50 % 4 7 2707
40 % 5 8 2412
30 % 5 8 2260
Entity #2 | Chains: C,D,F,H
FACTOR H BINDING PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 5362
95 % 4 7 3523
90 % 5 8 3060
70 % 8 13 1942
50 % 8 13 1964
40 % 8 13 1973
30 % 8 13 1886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.