Sequence Similarity Clusters for the Entities in PDB 2W80

Entity #1 | Chains: A,B,E,G
COMPLEMENT FACTOR H protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2417
95 % 3 6 3042
90 % 3 6 3087
70 % 3 6 3065
50 % 4 7 2872
40 % 5 8 2546
30 % 5 8 2379
Entity #2 | Chains: C,D,F,H
FACTOR H BINDING PROTEIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 5131
95 % 4 8 3414
90 % 5 9 3051
70 % 8 14 2010
50 % 8 14 2010
40 % 8 14 2015
30 % 8 14 1935

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.