Sequence Similarity Clusters for the Entities in PDB 2VV1

Entity #1 | Chains: A
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 147 90
95 % 72 155 113 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 72 155 117
70 % 72 155 135
50 % 108 212 103
40 % 108 212 127
30 % 583 936 10
Entity #2 | Chains: B
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55109
95 % 73 155 113 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 73 155 117
70 % 73 155 135
50 % 109 212 103
40 % 109 212 127
30 % 584 936 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.