Sequence Similarity Clusters for the Entities in PDB 2VV1

Entity #1 | Chains: A
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 152 88
95 % 75 160 115 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 75 160 119
70 % 75 160 135
50 % 111 217 104
40 % 111 217 129
30 % 618 983 10
Entity #2 | Chains: B
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56664
95 % 76 160 115 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 76 160 119
70 % 76 160 135
50 % 112 217 104
40 % 112 217 129
30 % 619 983 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.