Sequence Similarity Clusters for the Entities in PDB 2VV0

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 20 1421
95 % 136 177 121 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.6
PDBFlex
90 % 136 177 124
70 % 136 177 140
50 % 181 236 110
40 % 181 236 133
30 % 1020 1304 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures