Sequence Similarity Clusters for the Entities in PDB 2VST

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 20 1412
95 % 122 177 120 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.6
PDBFlex
90 % 122 177 123
70 % 122 177 139
50 % 163 236 109
40 % 163 236 132
30 % 943 1302 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures