Sequence Similarity Clusters for the Entities in PDB 2VM6

Entity #1 | Chains: A
BCL-2-RELATED PROTEIN A1 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10833
95 % 7 9 8056 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 7 9 8003
70 % 11 13 4863
50 % 11 13 4657
40 % 11 13 4421
30 % 11 13 4054
Entity #2 | Chains: B
BCL-2-LIKE PROTEIN 11 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 5679
95 % 9 14 3914 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.9
PDBFlex
90 % 15 21 2050
70 % 18 26 1611
50 % 18 26 1653
40 % 18 26 1672
30 % 18 26 1644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures