Sequence Similarity Clusters for the Entities in PDB 2VM6

Entity #1 | Chains: A
BCL-2-RELATED PROTEIN A1 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 11036
95 % 7 9 8195 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 7 9 8137
70 % 11 13 4945
50 % 11 13 4726
40 % 11 13 4476
30 % 11 13 4116
Entity #2 | Chains: B
BCL-2-LIKE PROTEIN 11 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 5777
95 % 9 14 3977 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.9
PDBFlex
90 % 15 21 2092
70 % 18 26 1634
50 % 18 26 1680
40 % 18 26 1694
30 % 18 26 1665

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures