Sequence Similarity Clusters for the Entities in PDB 2VKI

Entity #1 | Chains: A
3-PHOPSHOINOSITIDE DEPENDENT PROTEIN KINASE 1 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52478
95 % 4 4 10905 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 4 4 10751
70 % 4 4 10159
50 % 4 4 9149
40 % 4 4 8281
30 % 4 4 7166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures