Sequence Similarity Clusters for the Entities in PDB 2VJ6

Entity #1 | Chains: A
BETA-SECRETASE 1 protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 19 3339
95 % 89 368 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 89 368 17
70 % 89 368 25
50 % 90 380 61
40 % 90 380 81
30 % 633 1126 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures