Sequence Similarity Clusters for the Entities in PDB 2VIZ

Entity #1 | Chains: A
BETA-SECRETASE 1 protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 19 3426
95 % 30 369 26 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 30 369 29
70 % 30 369 39
50 % 31 381 69
40 % 31 381 88
30 % 532 1128 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures