Sequence Similarity Clusters for the Entities in PDB 2VIZ

Entity #1 | Chains: A
BETA-SECRETASE 1 protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 19 3215
95 % 29 365 14 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 29 365 15
70 % 29 365 23
50 % 30 377 41
40 % 30 377 58
30 % 530 1121 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures