Sequence Similarity Clusters for the Entities in PDB 2V4H

Entity #1 | Chains: A,B
NF-KAPPA-B ESSENTIAL MODULATOR protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45489
95 % 1 1 34069 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.5
PDBFlex
90 % 2 2 19250
70 % 2 2 17739
50 % 2 2 15425
40 % 2 2 13753
30 % 2 2 11762
Entity #2 | Chains: C,D
1D5 DARPIN protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43955
95 % 1 1 33038
90 % 2 2 18786
70 % 64 73 274
50 % 78 88 218
40 % 96 117 189
30 % 178 214 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.