Sequence Similarity Clusters for the Entities in PDB 2V4H

Entity #1 | Chains: A,B
NF-KAPPA-B ESSENTIAL MODULATOR protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46160
95 % 1 1 34570 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.5
PDBFlex
90 % 2 2 19618
70 % 2 2 18028
50 % 2 2 15662
40 % 2 2 13962
30 % 2 2 11942
Entity #2 | Chains: C,D
1D5 DARPIN protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44607
95 % 1 1 33533 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 2 19150
70 % 68 77 274
50 % 82 92 215
40 % 100 121 189
30 % 183 220 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.