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X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
Sequence Clustering and Redundancy Reduction Results
2V2T
Sequence Clusters for the Sequence Entities in PDB 2V2T
Entity #1: Chains: A - TRANSCRIPTION FACTOR RELB protein, length: 288 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 27426
95% 2 2 21693
90% 2 2 21036
70% 2 2 19215
50% 11 13 2075
40% 20 25 1024
30% 20 25 998
Entity #2: Chains: B - NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT protein, length: 326 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 9 2329
95% 8 10 2707
90% 8 10 2745
70% 8 10 2739
50% 10 12 2281
40% 21 25 1024
30% 21 25 998
Entity #3: Chains: C,D - 5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3' dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.