Sequence Similarity Clusters for the Entities in PDB 2V2T

Entity #1 | Chains: A
TRANSCRIPTION FACTOR RELB protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32704
95 % 2 2 25641
90 % 2 2 24781
70 % 2 2 22505
50 % 11 13 2448
40 % 20 25 1215
30 % 20 25 1195
Entity #2 | Chains: B
NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 2855
95 % 8 10 3284
90 % 8 10 3334
70 % 8 10 3300
50 % 10 12 2697
40 % 21 25 1215
30 % 21 25 1195
Entity #3 | Chains: C,D
5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.