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An Information Portal to 105025 Biological Macromolecular Structures

X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
Sequence Clustering and Redundancy Reduction Results
2V2T
Sequence Clusters for the Sequence Entities in PDB 2V2T
Entity #1: Chains: A - TRANSCRIPTION FACTOR RELB protein, length: 288 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 27607
95% 2 2 21839
90% 2 2 21175
70% 2 2 19337
50% 11 13 2089
40% 20 25 1039
30% 20 25 1013
Entity #2: Chains: B - NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT protein, length: 326 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 7 9 2353
95% 8 10 2723
90% 8 10 2760
70% 8 10 2758
50% 10 12 2297
40% 21 25 1039
30% 21 25 1013
Entity #3: Chains: C,D - 5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3' dna, length: 11 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.