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REPLACE: A strategy for Iterative Design of Cyclin Binding Groove Inhibitors
Sequence Clustering and Redundancy Reduction Results
2UUE
Sequence Clusters for the Sequence Entities in PDB 2UUE
Entity #1: Chains: A,C - CELL DIVISION PROTEIN KINASE 2 protein, length: 298 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 194 331 6
95% 197 346 13
90% 197 346 16
70% 197 346 21
50% 204 365 22
40% 207 411 26
30% 923 2694 2
Entity #2: Chains: B,D - CYCLIN A2 protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 80 59
95% 13 96 84
90% 15 100 83
70% 15 100 103
50% 15 100 141
40% 15 100 170
30% 15 102 190
Entity #3: Chains: E,F - GVC-TETRAPEPTIDE INHIBITOR protein, length: 5 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.