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REPLACE: A strategy for Iterative Design of Cyclin Binding Groove Inhibitors
Sequence Clustering and Redundancy Reduction Results
2UUE
Sequence Clusters for the Sequence Entities in PDB 2UUE
Entity #1: Chains: A,C - CELL DIVISION PROTEIN KINASE 2 protein, length: 298 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 196 336 6
95% 199 351 14
90% 199 351 16
70% 199 351 21
50% 206 370 24
40% 209 416 26
30% 974 2836 2
Entity #2: Chains: B,D - CYCLIN A2 protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 82 88
95% 14 101 96
90% 16 105 97
70% 16 105 116
50% 16 105 157
40% 16 105 179
30% 16 107 193
Entity #3: Chains: E,F - GVC-TETRAPEPTIDE INHIBITOR protein, length: 5 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.