Sequence Similarity Clusters for the Entities in PDB 2UU9

Entity #1 | Chains: A
16S RRNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 253 35
95 % 134 254 48
90 % 134 254 53
70 % 134 254 63
50 % 163 356 28
40 % 163 356 38
30 % 180 429 35
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 255 33
95 % 134 255 43
90 % 134 255 48
70 % 134 255 57
50 % 157 350 35
40 % 176 430 21
30 % 176 431 34
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 207 46
95 % 134 262 35
90 % 134 262 40
70 % 157 361 23
50 % 157 362 27
40 % 157 362 37
30 % 157 362 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 256 31
95 % 134 256 41
90 % 134 256 46
70 % 134 256 55
50 % 160 355 32
40 % 160 355 43
30 % 177 430 38
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 254 34
95 % 134 254 49
90 % 134 254 54
70 % 134 255 60
50 % 134 255 86
40 % 134 255 107
30 % 134 255 119
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 258 27
95 % 138 263 34
90 % 138 263 39
70 % 138 263 48
50 % 164 363 26
40 % 164 364 36
30 % 164 364 55
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 250 36
95 % 134 255 45
90 % 134 255 50
70 % 134 255 59
50 % 134 255 85
40 % 134 256 106
30 % 160 353 61
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 162 57
95 % 133 249 51
90 % 134 253 55
70 % 134 253 64
50 % 134 253 88
40 % 134 253 109
30 % 134 253 122
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 106 169 56
95 % 120 220 63
90 % 120 220 68
70 % 120 220 78
50 % 120 220 108
40 % 120 220 131
30 % 120 220 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 135 258 26
95 % 135 258 37
90 % 135 258 43
70 % 135 258 52
50 % 158 353 31
40 % 158 353 41
30 % 158 353 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 255 28
95 % 134 256 38
90 % 134 256 44
70 % 134 256 53
50 % 157 349 34
40 % 157 350 44
30 % 157 350 60
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 203 47
95 % 134 254 47
90 % 134 254 52
70 % 134 254 62
50 % 134 254 87
40 % 134 254 108
30 % 134 254 120
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 245 38
95 % 134 245 53
90 % 134 245 57
70 % 134 245 68
50 % 134 245 93
40 % 134 245 117
30 % 134 245 131
Entity #22 | Chains: X
RNA rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #23 | Chains: Y
RNA rna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 119 219 44
95 % 119 219 64
90 % 119 219 69
70 % 119 219 79
50 % 124 273 78
40 % 124 273 99
30 % 124 273 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 133 248 37
95 % 134 256 39
90 % 134 256 45
70 % 134 256 54
50 % 157 350 33
40 % 157 351 42
30 % 157 351 59
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 255 32
95 % 134 255 42
90 % 134 255 47
70 % 134 255 56
50 % 158 354 30
40 % 158 354 40
30 % 158 356 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 136 260 24
95 % 142 266 33
90 % 142 266 36
70 % 142 266 45
50 % 142 266 83
40 % 142 266 101
30 % 162 309 77
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 135 259 25
95 % 135 260 36
90 % 135 260 41
70 % 135 260 50
50 % 157 309 53
40 % 157 310 66
30 % 157 310 86
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 255 30
95 % 134 255 40
90 % 135 259 42
70 % 135 259 51
50 % 160 356 29
40 % 161 358 39
30 % 179 434 32
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 110 164 72
95 % 134 255 44
90 % 134 255 49
70 % 134 255 58
50 % 157 350 36
40 % 157 350 45
30 % 174 425 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.