Sequence Similarity Clusters for the Entities in PDB 2UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 6416
95 % 10 12 5309
90 % 10 12 5313
70 % 15 43 1116
50 % 15 45 924
40 % 15 45 951
30 % 15 45 944
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 4633
95 % 10 12 5261
90 % 10 12 5266
70 % 10 12 5161
50 % 10 12 4879
40 % 10 12 4597
30 % 10 12 4157
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 6631
95 % 10 12 4594
90 % 10 12 4619
70 % 10 12 4582
50 % 15 48 782
40 % 15 48 809
30 % 15 48 810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.