Sequence Similarity Clusters for the Entities in PDB 2UBP

Entity #1 | Chains: A
PROTEIN (UREASE GAMMA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 7099
95 % 11 13 4927
90 % 11 13 4940
70 % 16 44 1201
50 % 16 46 1023
40 % 16 46 1034
30 % 16 46 1013
Entity #2 | Chains: B
PROTEIN (UREASE BETA SUBUNIT) protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 13 4139
95 % 11 13 4906
90 % 11 13 4922
70 % 11 13 4849
50 % 11 13 4664
40 % 11 13 4432
30 % 11 13 4050
Entity #3 | Chains: C
PROTEIN (UREASE ALPHA SUBUNIT) protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 7329
95 % 11 13 4707
90 % 11 13 4716
70 % 11 13 4619
50 % 16 49 878
40 % 16 49 907
30 % 16 49 889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.