2TMV

VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTION


Sequence Similarity Clusters for the Entities in PDB 2TMV

Entity #1 | Chains: R
RNA (5'-R(P*GP*AP*A)-3') rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
TMV COAT PROTEIN protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 10110
95 % 6 6 10133
90 % 6 6 9997
70 % 7 7 8623
50 % 7 7 7810
40 % 10 10 5237
30 % 10 10 4699

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.