Sequence Similarity Clusters for the Entities in PDB 2TLD

Entity #1 | Chains: E
TRYPSIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60330
95 % 429 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 429 448 34
70 % 506 532 19
50 % 626 683 14
40 % 1450 1698 4
30 % 1566 1848 6
Entity #2 | Chains: I
STREPTOMYCES SUBTILISIN INHIBITOR (SSI) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46740
95 % 5 5 14969 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 5 14696
70 % 5 5 13775
50 % 5 5 12228
40 % 7 8 4409
30 % 7 8 4044

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures