Sequence Similarity Clusters for the Entities in PDB 2TLD

Entity #1 | Chains: E
TRYPSIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53117
95 % 447 471 19 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 447 471 22
70 % 527 558 19
50 % 646 708 14
40 % 1586 1873 4
30 % 1595 1887 7
Entity #2 | Chains: I
STREPTOMYCES SUBTILISIN INHIBITOR (SSI) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36280
95 % 5 5 15580 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 5 15252
70 % 5 5 14275
50 % 5 5 12608
40 % 7 8 4500
30 % 7 8 4056

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures