Sequence Similarity Clusters for the Entities in PDB 2SOD

Entity #1 | Chains: B,G,O,Y
COPPER,ZINC SUPEROXIDE DISMUTASE protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 18 1006
95 % 25 26 1007 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 25 26 1037
70 % 87 112 53
50 % 115 152 56
40 % 116 153 71
30 % 137 181 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures