Sequence Similarity Clusters for the Entities in PDB 2RDA

Entity #1 | Chains: A,B,C,D,E,F
Thymidylate synthase protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 2062
95 % 38 52 288 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 45 60 248
70 % 48 63 278
50 % 129 155 109
40 % 186 217 107
30 % 187 218 118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.