Sequence Similarity Clusters for the Entities in PDB 2RD8

Entity #1 | Chains: A
Thymidylate synthase protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 20 891
95 % 35 52 303
90 % 43 61 262
70 % 45 63 290
50 % 170 214 96
40 % 171 216 118
30 % 176 222 127
Entity #2 | Chains: B
Thymidylate synthase protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 20 891
95 % 36 52 303 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 44 61 262
70 % 46 63 290
50 % 171 214 96
40 % 172 216 118
30 % 177 222 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures