Sequence Similarity Clusters for the Entities in PDB 2RD8

Entity #1 | Chains: A
Thymidylate synthase protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 2079
95 % 35 52 290
90 % 42 60 249
70 % 45 63 281
50 % 121 155 110
40 % 171 217 107
30 % 172 218 119
Entity #2 | Chains: B
Thymidylate synthase protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2079
95 % 36 52 290 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 43 60 249
70 % 46 63 281
50 % 122 155 110
40 % 172 217 107
30 % 173 218 119

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures