Sequence Similarity Clusters for the Entities in PDB 2RCA

Entity #1 | Chains: A,B
Glutamate [NMDA] receptor subunit 3B protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19655
95 % 1 2 17414 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 17067
70 % 4 6 5584
50 % 4 6 5272
40 % 4 6 4961
30 % 9 72 693

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures