Sequence Similarity Clusters for the Entities in PDB 2RCA

Entity #1 | Chains: A,B
Glutamate [NMDA] receptor subunit 3B protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17484
95 % 1 2 16144 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 15811
70 % 4 6 5463
50 % 4 6 5193
40 % 4 6 4869
30 % 65 360 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures