Sequence Similarity Clusters for the Entities in PDB 2RCA

Entity #1 | Chains: A,B
Glutamate [NMDA] receptor subunit 3B protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18828
95 % 1 2 16707 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 16367
70 % 4 6 5338
50 % 4 6 5054
40 % 4 6 4762
30 % 9 72 663

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.