Sequence Similarity Clusters for the Entities in PDB 2R4S

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42066
95 % 2 3 25974 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 16866
70 % 10 15 4937
50 % 122 156 249
40 % 134 169 258
30 % 135 172 269
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29685
95 % 3 4 17871 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 28 30 2011
70 % 2313 2696 1
50 % 4702 5473 1
40 % 5276 6175 1
30 % 6548 7653 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29686
95 % 2 3 25975 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 25049
70 % 2280 2655 2
50 % 4703 5473 1
40 % 5277 6175 1
30 % 6549 7653 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2R4R 2 L antibody for beta2 adrenoceptor, light chain 10090
2 2R4S 2 L antibody for beta2 adrenoceptor, light chain 10090
3 3KJ6 2 L Fab light chain 10090