Sequence Similarity Clusters for the Entities in PDB 2R4S

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 43022
95 % 2 3 26524 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 17231
70 % 10 15 5060
50 % 125 159 252
40 % 151 191 243
30 % 152 194 252
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30343
95 % 3 4 18239 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 28 30 2067
70 % 2355 2765 1
50 % 4798 5625 1
40 % 5412 6382 1
30 % 6750 7934 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30344
95 % 2 3 26525 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 25583
70 % 2326 2728 2
50 % 4799 5625 1
40 % 5413 6382 1
30 % 6751 7934 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2R4R 1 A Beta-2 adrenergic receptor 9606
2 2R4S 1 A Beta-2 adrenergic receptor 9606
3 3KJ6 1 A Beta-2 adrenergic receptor 9606
4 4GBR 1 A Beta-2 adrenergic receptor UNP RESIDUES 29-365 9606