Sequence Similarity Clusters for the Entities in PDB 2R4S

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41988
95 % 2 3 25928 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 16827
70 % 10 15 4932
50 % 122 154 253
40 % 134 167 260
30 % 135 170 271
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29633
95 % 3 4 17828 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 28 30 2010
70 % 2313 2696 1
50 % 4702 5473 1
40 % 5276 6175 1
30 % 6543 7645 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29634
95 % 2 3 25929 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 25003
70 % 2280 2655 2
50 % 4703 5473 1
40 % 5277 6175 1
30 % 6544 7645 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2R4R 1 A Beta-2 adrenergic receptor 9606
2 2R4S 1 A Beta-2 adrenergic receptor 9606
3 3KJ6 1 A Beta-2 adrenergic receptor 9606
4 4GBR 1 A Beta-2 adrenergic receptor UNP RESIDUES 29-365 9606