Sequence Similarity Clusters for the Entities in PDB 2R4S

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40344
95 % 2 3 24859 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 16107
70 % 10 15 4708
50 % 102 134 294
40 % 110 143 291
30 % 110 145 301
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28405
95 % 3 4 17023 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 26 27 2155
70 % 2203 2553 1
50 % 4475 5180 1
40 % 5020 5834 1
30 % 6268 7269 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29051
95 % 2 3 24860 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 24015
70 % 2168 2511 2
50 % 4476 5180 1
40 % 5021 5834 1
30 % 6269 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2R4R 1 A Beta-2 adrenergic receptor 9606
2 2R4S 1 A Beta-2 adrenergic receptor 9606
3 3KJ6 1 A Beta-2 adrenergic receptor 9606
4 4GBR 1 A Beta-2 adrenergic receptor UNP RESIDUES 29-365 9606