Sequence Similarity Clusters for the Entities in PDB 2R4S

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40827
95 % 2 3 25167 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 16298
70 % 10 15 4777
50 % 102 134 304
40 % 111 144 298
30 % 111 146 307
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28775
95 % 3 4 17241 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 26 27 2193
70 % 2234 2593 1
50 % 4542 5263 1
40 % 5096 5933 1
30 % 6357 7388 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29443
95 % 2 3 25168 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 24303
70 % 2200 2550 2
50 % 4543 5263 1
40 % 5097 5933 1
30 % 6358 7388 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures