Sequence Similarity Clusters for the Entities in PDB 2R4R

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33659
95 % 1 3 21405 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 3 20808
70 % 1 4 14787
50 % 13 22 1390
40 % 13 22 1405
30 % 19 34 1024
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27156
95 % 2 4 18086 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 24 26 2092
70 % 1950 2264 1
50 % 3956 4587 1
40 % 3956 4587 1
30 % 4677 5394 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27068
95 % 1 3 22558 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 21860
70 % 1914 2222 2
50 % 3957 4587 1
40 % 3957 4587 1
30 % 4678 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.