Sequence Similarity Clusters for the Entities in PDB 2R4R

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 33131
95 % 1 3 21068
90 % 1 3 20492
70 % 1 4 14556
50 % 13 22 1368
40 % 13 22 1391
30 % 19 34 1009
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26719
95 % 2 4 17794 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.6
PDBFlex
90 % 23 25 2223
70 % 1595 1822 2
50 % 3890 4489 1
40 % 3890 4489 1
30 % 4607 5290 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26632
95 % 1 3 22207 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 3 21529
70 % 1880 2172 1
50 % 3891 4489 1
40 % 3891 4489 1
30 % 4608 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.