Sequence Similarity Clusters for the Entities in PDB 2R4R

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34958
95 % 1 3 22236
90 % 1 3 21598
70 % 1 4 15365
50 % 13 22 1427
40 % 13 22 1440
30 % 19 34 1062
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28204
95 % 2 4 18780
90 % 24 26 2170
70 % 2056 2392 1
50 % 4168 4843 1
40 % 4168 4843 1
30 % 4944 5705 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28110
95 % 1 3 23428 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 22676
70 % 2012 2342 2
50 % 4169 4843 1
40 % 4169 4843 1
30 % 4945 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures