Sequence Similarity Clusters for the Entities in PDB 2R4R

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 35659
95 % 1 3 22686
90 % 1 3 22020
70 % 1 4 15663
50 % 13 22 1459
40 % 13 22 1463
30 % 19 34 1084
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28787
95 % 2 4 19180
90 % 24 26 2233
70 % 2121 2474 1
50 % 4302 5011 1
40 % 4302 5011 1
30 % 5144 5941 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28692
95 % 1 3 23886 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 23107
70 % 2077 2424 2
50 % 4303 5011 1
40 % 4303 5011 1
30 % 5145 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures