Sequence Similarity Clusters for the Entities in PDB 2R4R

Entity #1 | Chains: A
Beta-2 adrenergic receptor protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34197
95 % 1 3 21773
90 % 1 3 21159
70 % 1 4 15045
50 % 13 22 1401
40 % 13 22 1417
30 % 19 34 1033
Entity #2 | Chains: L
antibody for beta2 adrenoceptor, light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27596
95 % 2 4 18380 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.7
PDBFlex
90 % 24 26 2116
70 % 1969 2287 1
50 % 3994 4633 1
40 % 3994 4633 1
30 % 4736 5461 1
Entity #3 | Chains: H
antibody for beta2 adrenoceptor, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27505
95 % 1 3 22946 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 22227
70 % 1932 2244 2
50 % 3995 4633 1
40 % 3995 4633 1
30 % 4737 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.