Sequence Similarity Clusters for the Entities in PDB 2R0Q

Entity #1 | Chains: A,G
31-MER dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,H
31-MER dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,D,E,F
Putative transposon Tn552 DNA-invertase bin3 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20740
95 % 1 1 18003 Flexibility: High
Max RMSD: 20.0, Avg RMSD: 13.5
PDBFlex
90 % 1 1 17550
70 % 1 1 16244
50 % 1 1 14139
40 % 1 1 12598
30 % 2 9 2504

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.