Sequence Similarity Clusters for the Entities in PDB 2R0Q

Entity #1 | Chains: A,G
31-MER dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,H
31-MER dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,D,E,F
Putative transposon Tn552 DNA-invertase bin3 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22299
95 % 1 1 19274 Flexibility: High
Max RMSD: 20.0, Avg RMSD: 13.5
PDBFlex
90 % 1 1 18771
70 % 1 1 17330
50 % 1 1 15034
40 % 1 1 13380
30 % 2 9 2666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures