Sequence Similarity Clusters for the Entities in PDB 2PYP

Entity #1 | Chains: A
PHOTOACTIVE YELLOW PROTEIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 39 998
95 % 53 67 702 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 53 67 732
70 % 53 67 785
50 % 53 67 830
40 % 53 68 817
30 % 53 68 808

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.