Sequence Similarity Clusters for the Entities in PDB 2PTC

Entity #1 | Chains: E
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 337 404 27
95 % 379 463 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 379 463 21
70 % 423 547 18
50 % 467 698 14
40 % 924 1720 4
30 % 983 1870 6
Entity #2 | Chains: I
TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 44 367
95 % 49 90 256 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 54 95 260
70 % 68 115 177
50 % 77 149 184
40 % 79 163 179
30 % 79 163 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures