Sequence Similarity Clusters for the Entities in PDB 2PRG

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 60 146 108
95 % 66 169 117 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 66 169 121
70 % 66 169 138
50 % 97 227 107
40 % 97 227 130
30 % 697 1254 8
Entity #2 | Chains: C
NUCLEAR RECEPTOR COACTIVATOR SRC-1 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56705
95 % 1 1 46479
90 % 1 1 44175
70 % 1 1 38868
50 % 1 1 32978
40 % 1 1 28891
30 % 1 1 24131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures