Sequence Similarity Clusters for the Entities in PDB 2PRG

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 151 88
95 % 62 159 112 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 62 159 117
70 % 62 159 132
50 % 92 216 102
40 % 92 216 128
30 % 550 979 9
Entity #2 | Chains: C
NUCLEAR RECEPTOR COACTIVATOR SRC-1 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69139
95 % 1 1 47792
90 % 1 1 45375
70 % 1 1 39926
50 % 1 1 34131
40 % 1 1 30099
30 % 1 1 25382

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.