Sequence Similarity Clusters for the Entities in PDB 2PRG

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 152 88
95 % 62 160 115 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 62 160 119
70 % 62 160 135
50 % 92 217 104
40 % 92 217 129
30 % 551 983 10
Entity #2 | Chains: C
NUCLEAR RECEPTOR COACTIVATOR SRC-1 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70238
95 % 1 1 48614
90 % 1 1 46140
70 % 1 1 40490
50 % 1 1 34529
40 % 1 1 30435
30 % 1 1 25667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.