Sequence Similarity Clusters for the Entities in PDB 2PRG

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 155 87
95 % 62 163 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 62 163 121
70 % 62 163 137
50 % 92 220 105
40 % 92 220 128
30 % 554 992 10
Entity #2 | Chains: C
NUCLEAR RECEPTOR COACTIVATOR SRC-1 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71112
95 % 1 1 49207
90 % 1 1 46662
70 % 1 1 40900
50 % 1 1 34874
40 % 1 1 30730
30 % 1 1 25918

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures