Sequence Similarity Clusters for the Entities in PDB 2PNM

Entity #1 | Chains: A
Protease VP4 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6857
95 % 2 2 7521 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.0
PDBFlex
90 % 2 2 7509
70 % 4 7 4005
50 % 4 7 4105
40 % 4 7 4021
30 % 4 7 3921

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures