Sequence Similarity Clusters for the Entities in PDB 2PNM

Entity #1 | Chains: A
Protease VP4 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5747
95 % 2 2 6413 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.2
PDBFlex
90 % 2 2 6394
70 % 4 7 3553
50 % 4 7 3462
40 % 4 7 3349
30 % 4 7 3127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.