Sequence Similarity Clusters for the Entities in PDB 2PNM

Entity #1 | Chains: A
Protease VP4 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6436
95 % 2 2 6794 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.2
PDBFlex
90 % 2 2 6784
70 % 4 7 3764
50 % 4 7 3667
40 % 4 7 3491
30 % 4 7 3211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures