Sequence Similarity Clusters for the Entities in PDB 2PNM

Entity #1 | Chains: A
Protease VP4 protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5884
95 % 2 2 6544 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.2
PDBFlex
90 % 2 2 6527
70 % 4 7 3653
50 % 4 7 3549
40 % 4 7 3422
30 % 4 7 3198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures