Sequence Similarity Clusters for the Entities in PDB 2PMQ

Entity #1 | Chains: A,B
Mandelate racemase/muconate lactonizing enzyme protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6255
95 % 2 2 6900 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 2 2 6881
70 % 2 2 6709
50 % 4 5 3916
40 % 4 5 3754
30 % 44 238 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures