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STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Sequence Clustering and Redundancy Reduction Results
2PLV
Sequence Clusters for the Sequence Entities in PDB 2PLV
Entity #1: Chains: 1 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 16 2257
95% 2 20 2140
90% 2 20 2175
70% 4 29 1382
50% 4 31 1358
40% 12 97 376
30% 14 120 308
Entity #2: Chains: 2 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 20 1641
95% 2 22 1922
90% 2 22 1955
70% 4 33 1197
50% 14 128 249
40% 14 128 275
30% 21 149 136
Entity #3: Chains: 3 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 22 1429
95% 2 22 1931
90% 2 22 1963
70% 4 33 1198
50% 12 100 345
40% 14 127 281
30% 21 150 138
Entity #4: Chains: 4 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 16 2409
95% 3 18 2574
90% 4 26 1594
70% 8 72 462
50% 12 98 356
40% 12 98 375
30% 12 98 383
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.