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STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Sequence Clustering and Redundancy Reduction Results
2PLV
Sequence Clusters for the Sequence Entities in PDB 2PLV
Entity #1: Chains: 1 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 18 2130
95% 2 22 2145
90% 2 22 2174
70% 4 31 1448
50% 8 37 1242
40% 20 134 242
30% 20 134 255
Entity #2: Chains: 2 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 22 1617
95% 2 24 1931
90% 2 24 1970
70% 8 39 1117
50% 20 136 258
40% 20 136 284
30% 27 157 153
Entity #3: Chains: 3 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 24 1450
95% 2 24 1949
90% 2 24 1989
70% 8 39 1118
50% 16 106 348
40% 20 141 232
30% 27 162 138
Entity #4: Chains: 4 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 18 2258
95% 3 20 2517
90% 4 28 1652
70% 12 78 448
50% 18 106 351
40% 18 106 380
30% 18 106 386
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.