Sequence Similarity Clusters for the Entities in PDB 2PLV

Entity #1 | Chains: 1
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 21 2216
95 % 2 25 2272 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 25 2337
70 % 4 36 1500
50 % 8 42 1324
40 % 25 155 276
30 % 25 155 284
Entity #2 | Chains: 2
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 29 1427
95 % 2 31 1754 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 31 1788
70 % 8 48 1113
50 % 24 157 295
40 % 24 157 309
30 % 34 192 180
Entity #3 | Chains: 3
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 31 1300
95 % 2 31 1758 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 31 1791
70 % 8 48 1116
50 % 25 164 241
40 % 25 166 258
30 % 35 203 157
Entity #4 | Chains: 4
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 21 2280
95 % 3 23 2654 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 4 33 1675
70 % 12 87 551
50 % 22 122 421
40 % 22 123 446
30 % 22 123 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.