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STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Sequence Clustering and Redundancy Reduction Results
2PLV
Sequence Clusters for the Sequence Entities in PDB 2PLV
Entity #1: Chains: 1 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 16 2390
95% 2 20 2274
90% 2 20 2307
70% 4 29 1493
50% 8 35 1267
40% 18 128 261
30% 18 128 280
Entity #2: Chains: 2 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 20 1768
95% 2 22 2049
90% 2 22 2079
70% 8 37 1134
50% 18 132 253
40% 18 132 281
30% 25 153 137
Entity #3: Chains: 3 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 22 1544
95% 2 22 2057
90% 2 22 2086
70% 8 37 1137
50% 16 104 338
40% 18 135 244
30% 25 156 128
Entity #4: Chains: 4 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 16 2544
95% 3 18 2707
90% 4 26 1711
70% 12 76 443
50% 16 102 350
40% 16 102 373
30% 16 102 382
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.