Sequence Similarity Clusters for the Entities in PDB 2PLV

Entity #1 | Chains: 1
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 21 2246
95 % 2 25 2299 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 25 2362
70 % 4 36 1517
50 % 8 42 1334
40 % 25 158 274
30 % 25 158 282
Entity #2 | Chains: 2
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 29 1444
95 % 2 31 1774
90 % 2 31 1809
70 % 8 48 1125
50 % 24 159 294
40 % 24 159 310
30 % 34 194 165
Entity #3 | Chains: 3
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 31 1315
95 % 2 31 1778 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 31 1812
70 % 8 48 1128
50 % 25 167 239
40 % 25 169 255
30 % 35 208 146
Entity #4 | Chains: 4
HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 21 2311
95 % 3 23 2686 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 4 33 1697
70 % 12 87 558
50 % 22 122 428
40 % 22 123 455
30 % 22 123 454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.