POP-OUT | CLOSE

An Information Portal to 108957 Biological Macromolecular Structures

STRUCTURAL FACTORS THAT CONTROL CONFORMATIONAL TRANSITIONS AND SEROTYPE SPECIFICITY IN TYPE 3 POLIOVIRUS
Sequence Clustering and Redundancy Reduction Results
2PLV
Sequence Clusters for the Sequence Entities in PDB 2PLV
Entity #1: Chains: 1 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP1) protein, length: 302 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 18 2105
95% 2 22 2122
90% 2 22 2148
70% 4 31 1429
50% 8 37 1231
40% 20 134 242
30% 20 134 254
Entity #2: Chains: 2 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 22 1600
95% 2 24 1907
90% 2 24 1946
70% 8 39 1110
50% 20 136 255
40% 20 136 282
30% 27 157 145
Entity #3: Chains: 3 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 24 1441
95% 2 24 1926
90% 2 24 1966
70% 8 39 1111
50% 16 106 344
40% 20 141 232
30% 27 162 128
Entity #4: Chains: 4 - HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 18 2229
95% 3 20 2490
90% 4 28 1631
70% 12 78 444
50% 18 106 348
40% 18 106 375
30% 18 106 380
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.