Sequence Similarity Clusters for the Entities in PDB 2OT8

Entity #1 | Chains: A,B
Transportin-1 protein, length: 852 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23542
95 % 13 15 2730
90 % 13 15 2776
70 % 13 15 2749
50 % 13 15 2709
40 % 13 15 2676
30 % 13 15 2498
Entity #2 | Chains: C,D
Heterogeneous nuclear ribonucleoprotein M protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46875
95 % 1 1 35058
90 % 1 1 33542
70 % 1 1 29984
50 % 1 1 25751
40 % 1 1 22784
30 % 1 1 19393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.