Sequence Similarity Clusters for the Entities in PDB 2OT8

Entity #1 | Chains: A,B
Transportin-1 protein, length: 852 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24601
95 % 13 15 2836
90 % 13 15 2879
70 % 13 15 2848
50 % 13 15 2812
40 % 13 15 2767
30 % 13 15 2590
Entity #2 | Chains: C,D
Heterogeneous nuclear ribonucleoprotein M protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48723
95 % 1 1 36460
90 % 1 1 34830
70 % 1 1 31029
50 % 1 1 26578
40 % 1 1 23504
30 % 1 1 20000

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.