Sequence Similarity Clusters for the Entities in PDB 2OT8

Entity #1 | Chains: A,B
Transportin-1 protein, length: 852 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21662
95 % 11 13 2888
90 % 11 13 2933
70 % 11 13 2920
50 % 11 13 2854
40 % 11 13 2793
30 % 11 13 2621
Entity #2 | Chains: C,D
Heterogeneous nuclear ribonucleoprotein M protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43272
95 % 1 1 32417
90 % 1 1 31044
70 % 1 1 27805
50 % 1 1 23937
40 % 1 1 21231
30 % 1 1 18069

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.