Sequence Similarity Clusters for the Entities in PDB 2OJT

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 1 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 15 1201
95 % 27 43 462 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.8
PDBFlex
90 % 27 43 501
70 % 54 86 212
50 % 162 271 33
40 % 162 272 44
30 % 176 288 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.