Sequence Similarity Clusters for the Entities in PDB 2OJ5

Entity #1 | Chains: A,B,C,D,E,F
Viral attachment protein sigma 1 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3012
95 % 2 4 2663 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 4 2718
70 % 2 4 2709
50 % 2 4 2673
40 % 2 4 2620
30 % 2 4 2478

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures