Sequence Similarity Clusters for the Entities in PDB 2O39

Entity #1 | Chains: A,B
Fiber protein protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15711
95 % 3 3 14714 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 5 6 3280
70 % 5 6 3246
50 % 10 13 923
40 % 10 13 954
30 % 33 37 438
Entity #2 | Chains: C,D
Membrane cofactor protein protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 2282
95 % 1 4 2925
90 % 1 4 2963
70 % 1 4 2925
50 % 1 4 2883
40 % 1 4 2834
30 % 21 49 642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures