Sequence Similarity Clusters for the Entities in PDB 2O39

Entity #1 | Chains: A,B
Fiber protein protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15425
95 % 3 3 14485 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 5 6 3212
70 % 5 6 3180
50 % 10 13 914
40 % 10 13 942
30 % 33 37 426
Entity #2 | Chains: C,D
Membrane cofactor protein protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 2230
95 % 1 4 2875
90 % 1 4 2916
70 % 1 4 2873
50 % 1 4 2833
40 % 1 4 2791
30 % 21 49 637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.